Talks

Image processing, visual analytics, and data sharing for whole-slide imaging
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Talk given on March 11, 2024 by Jeremy Muhlich (Harvard Medical School) for the Computation Center for Biomedicine (CCB) Seminar Series at Harvard Medical School about image processing and analysis using the MCMICRO software pipeline.
Multiplexed Imaging of Cell-States and Spatial Organization in Liposarcoma
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Talk given by Shannon Coy, M.D. (Brigham and Women’s Hospital) for the 2024 David Liposarcoma Research Symposium on March 6, 2024.
Multiplexed Tissue Imaging to Reveal the Spatial Biology of Cancer
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During this presentation of the Cancer Moonshot Seminar Series, Sandro Santagata, M.D., Ph.D. (Brigham and Women’s Hospital) discusses multiplexed tissue imaging to reveal the spatial biology of tumors. This work is related to the Blue Ribbon Panel recommendation to generate human tumor atlases.
Atlas Introduction with Dr. Sandro Santagata and Sarah Arena
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This interview with Sandro Santagata, MD PhD, and Sarah Arena, MLIS, dive into the vision for the Gray BRCA Pre-Cancer Atlas.
Developing a Cloud Data Resource to Accelerate TB Research
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Bree Aldridge, PhD, Associate Professor at Tufts University School of Medicine and Tufts University School of Engineering, introduces the Tuberculosis Tumor Atlas.
Breast Cancer Atlas with Dr. Joan Brugge
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This interview with Dr. Joan Brugge describes her breast cancer research collected as part of the Gray BRCA Pre-Cancer Atlas.
Ovarian Cancer Atlas with Dr. Ronny Drapkin and Dr. Tanjina Kader
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This interview with Drs. Ronny Drapkin and Tanjina Kader describes preliminary ovarian cancer research collected as part of the Gray BRCA Pre-Cancer Atlas.
AACR Virtual Journal Club: Cancer Discovery With Dr. Peter Sorger
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This AACR Journal Club discusses features Peter Sorger, PhD, discussing his article “The Spatial Landscape of Progression and Immunoediting in Primary Melanoma at Single-Cell Resolution.” The intricacies of primary melanoma progression are revealed by a combination of high-plex imaging, 3D high-resolution microscopy, and spatially resolved microregion transcriptomics. Dr. Sorger shows that this unprecedented spatiotemoporal resolution uncovers recurrent cellular neighborhoods and the landscape of immune evasion and immunoediting.
Profiling of the Tumor Microenvironment to Improve Diagnosis and Therapy
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This webinar presents two projects from the Ludwig Centers at Harvard and MIT that are part of the Ludwig Tumor Atlas Project. The Ludwig Tumor Atlas applies diverse technologies to probe the tumor environment using a variety of methods, including highly multiplexed tissue imaging, dissociative single cell sequencing, spatial transcriptomics and conventional histology.
Multiplexed Technologies for Spatial Analysis of FFPE Tumor Samples
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Zoltan Maliga, PhD, Scientific Director of Tissue Imaging at the Laboratory of Systems Pharmacology, describes using multiplexed fluorescent tissue imaging to characterize Formalin-Fixed Paraffin-Embedded (FFPE) tissues.

Tissue Atlas Industry Showcases

HMS Tissue Atlas Program Industry Showcase, May 17, 2019
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HMS Tissue Atlas Program Industry Showcase, July 18, 2019
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HMS Tissue Atlas Program Industry Showcase, November 7, 2019
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